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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891884.1_cds_XP_016446775.1_41600
CDS Infomation

[gene=LOC107771840] [db_xref=GeneID:107771840] [protein=probable beta-1,4-xylosyltransferase IRX9H] [protein_id=XP_016446775.1] [location=complement(join(22918..23061,23214..23463,25975..26891))] [gbkey=CDS]
Sequence

ATGGCTTCAATAAGAAGAGCATTGTCCCCAGTACCTCGCCCGGGGAATAGAATTAATGGG
GAAGCATGTTCTGTTGCGTCGCCATTGTCCAAGTCATCGTCGTGTAATCAAAGTTATACA
CCGGCTGCAGGGGTTTTGCATTCTTTTTTTGGTTCATTGGATTATGCATTCTATAAAGTT
CGGACATTTGTAGTTGGTGTTTTGTCGCGAAGATCATCTAGGACATTAGAGAGGTCAAAG
CTAAAGGGCCAAATTTGGAGGAAAGCACTTCTCCAATTTTTTATGTGCTTTGTTCTTGGA
GTTTTTATTGGCCTCACTCCATTTGTTTCTCTGAATTTGTCAGCAAATATAATGTCGAAA
CATAAAGCTTTCTCCTTTGAGGTGTTCCACTCTTACGAAAATGGCCGCTTATTTGATGAT
TTGTCTAGGAATATGGCATCATCTGTAAACAGCTCGGCTTTCCTTGATAATTCTACGTCA
ACGACTAATAAATTATACAGTGAATTGAAAGCTGAAATTGCCGTCAATGCGTCTGTTAAC
CAATCACTTGATCAAGATTTGACGGCGTCAAGAAAACTTTTGATCATTGTAACGCCAACA
GAAGTTCGGTCATTTCAACCTTACAATCTAAACCGTTTATCCCACACGTTAAGATTAGTC
CCACCTCCTTTGTTGTGGATAGTTGTGGAGATGGACTTTCAGTCAACGGAGACAGCTAAT
ATATTGAGGAGAACCAGAGTTATGTACAGGCATCTCGTATGCAAGAAGAACTCCACCATA
GTGAAGGATAAAAGTGTGAACCTAAGGAATGTGGCACTAAACCACATTGAAACACACCAT
CTTGATGGGATTGTTTACTTCGCAGATGATTCCAACATATACTCAATTGATGTCTTTGAA
CAAATGCGGCAGATCAGCCAGTTCGGGACATGGGTTGTGGCAAGACTATCTGAAAATAAT
AGGAAAGTTATCTTGCAGGGTCCAATCTGTAATGGCTCTCAGGTTATAGGTTGGCATACA
GATGGAACGGCAAAAAGATTCCAGAGATTCTACGCTGAAATATCAGGATTTGCATTCAAT
AGTACAGTACTTTGGGATCCAAAGAGGTGGAGTCGGCCAACACTAGAGCCCATTAGGCAG
CTCGATATAGTTAAAGGTGGCTTGCAAGTGAGCGCATTTATTGAACAAGTTGTGGAAGAT
GAAAGCCAAATGGAAGGCTTTCCGACGCACTGCTCAAGAATCATGGTTTGGCAATTCAAC
ACAGAGCCATTGGTAAGGAGTTACAGGGGCACTATTACTGCAAGTGTGTGA

Peptide Sequence

PEP ID

XP_016446775.1
PEP Infomation

PREDICTED: probable beta-1,4-xylosyltransferase IRX9H [Nicotiana tabacum]
Sequence

MASIRRALSPVPRPGNRINGEACSVASPLSKSSSCNQSYTPAAGVLHSFFGSLDYAFYKV
RTFVVGVLSRRSSRTLERSKLKGQIWRKALLQFFMCFVLGVFIGLTPFVSLNLSANIMSK
HKAFSFEVFHSYENGRLFDDLSRNMASSVNSSAFLDNSTSTTNKLYSELKAEIAVNASVN
QSLDQDLTASRKLLIIVTPTEVRSFQPYNLNRLSHTLRLVPPPLLWIVVEMDFQSTETAN
ILRRTRVMYRHLVCKKNSTIVKDKSVNLRNVALNHIETHHLDGIVYFADDSNIYSIDVFE
QMRQISQFGTWVVARLSENNRKVILQGPICNGSQVIGWHTDGTAKRFQRFYAEISGFAFN
STVLWDPKRWSRPTLEPIRQLDIVKGGLQVSAFIEQVVEDESQMEGFPTHCSRIMVWQFN
TEPLVRSYRGTITASV

Transcript Sequence

Gene sequence data has not been registered.